RNAeffective

Fast and effective prediction of microRNA/target duplexes

Install

All systems
curl cmd.cat/RNAeffective.sh
Debian Debian
apt-get install rnahybrid
Ubuntu
apt-get install rnahybrid
image/svg+xml Kali Linux
apt-get install rnahybrid
Windows (WSL2)
sudo apt-get update sudo apt-get install rnahybrid
Raspbian
apt-get install rnahybrid
Dockerfile
dockerfile.run/RNAeffective

rnahybrid

Fast and effective prediction of microRNA/target duplexes

RNAhybrid is a tool for finding the minimum free energy hybridisation of a long and a short RNA. The hybridisation is performed in a kind of domain mode, ie. The short sequence is hybridised to the best fitting part of the long one. The tool is primarily meant as a means for microRNA target prediction.