SeqNoiseM
removal of noise from 454 sequenced PCR amplicons
Install
- All systems
-
curl cmd.cat/SeqNoiseM.sh
- Debian
-
apt-get install ampliconnoise - Ubuntu
-
apt-get install ampliconnoise - Kali Linux
-
apt-get install ampliconnoise - Windows (WSL2)
-
sudo apt-get updatesudo apt-get install ampliconnoise - Raspbian
-
apt-get install ampliconnoise - Dockerfile
- dockerfile.run/SeqNoiseM
ampliconnoise
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts: Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.