axe-demux
Trie-based DNA sequencing read demultiplexer
Install
- All systems
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curl cmd.cat/axe-demux.sh
- Debian
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apt-get install axe-demultiplexer - Ubuntu
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apt-get install axe-demultiplexer - Kali Linux
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apt-get install axe-demultiplexer - Windows (WSL2)
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sudo apt-get updatesudo apt-get install axe-demultiplexer - Raspbian
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apt-get install axe-demultiplexer - Dockerfile
- dockerfile.run/axe-demux
axe-demultiplexer
Trie-based DNA sequencing read demultiplexer
Axe very rapidly selects the optimal barcode present in a sequence read, even in the presence of sequencing errors. The algorithm is able to handle combinatorial barcoding, barcodes of differing length, and several mismatches per barcode.