biomaj-cli.py

BioMAJ client

Install

All systems
curl cmd.cat/biomaj-cli.py.sh
Debian Debian
apt-get install python3-biomaj3-cli
Ubuntu
apt-get install python3-biomaj3-cli
image/svg+xml Kali Linux
apt-get install python3-biomaj3-cli
Windows (WSL2)
sudo apt-get update sudo apt-get install python3-biomaj3-cli
Dockerfile
dockerfile.run/biomaj-cli.py

python3-biomaj3-cli

BioMAJ client

BioMAJ downloads remote data banks, checks their status and applies transformation workflows, with consistent state, to provide ready-to-use data for biologists and bioinformaticians. For example, it can transform original FASTA files into BLAST indexes. It is very flexible and its post-processing facilities can be extended very easily. BioMAJ3 is a rewrite of BioMAJ v1.x, see online documentation for migration. This package contains the client to execute BioMAJ3 or communicate with the BioMAJ daemon process (python3-biomaj3-daemon) in case of microservice config.