brig
BLAST Ring Image Generator
Install
- All systems
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curl cmd.cat/brig.sh
- Debian
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apt-get install brig - Ubuntu
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apt-get install brig - Kali Linux
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apt-get install brig - Windows (WSL2)
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sudo apt-get updatesudo apt-get install brig - Raspbian
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apt-get install brig - Dockerfile
- dockerfile.run/brig
brig
BLAST Ring Image Generator
BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. * Images show similarity between a central reference sequence and other sequences as concentric rings. * BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. * Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annotations can be displayed. * Using a user-defined set of genes as input, BRIG can display gene presence, absence, truncation or sequence variation in a set of complete genomes, draft genomes or even raw, unassembled sequence data. * BRIG also accepts SAM-formatted read-mapping files enabling genomic regions present in unassembled sequence data from multiple samples to be compared simultaneously