cdhit-est-2d
suite of programs designed to quickly group sequences
Install
- All systems
-
curl cmd.cat/cdhit-est-2d.sh
- Debian
-
apt-get install cd-hit - Ubuntu
-
apt-get install cd-hit - Kali Linux
-
apt-get install cd-hit - Windows (WSL2)
-
sudo apt-get updatesudo apt-get install cd-hit - Raspbian
-
apt-get install cd-hit - Dockerfile
- dockerfile.run/cdhit-est-2d
cd-hit
suite of programs designed to quickly group sequences
cd-hit contains a number of programs designed to quickly group sequences. cd-hit groups proteins into clusters that meet a user-defined similarity threshold. cd-hit-est is similar to cd-hit, but designed to group nucleotide sequences (without introns). cd-hit-est-2d is similar to cd-hit-2d but designed to compare two nucleotide datasets. A number of other related programs are also in this package. Please see the cd-hit user manual, also part of this package, for further information.