contig_draw

Generate GD images of Bio::Seq objects

Install

All systems
curl cmd.cat/contig_draw.sh
Debian Debian
apt-get install libbio-graphics-perl
Ubuntu
apt-get install libbio-graphics-perl
image/svg+xml Kali Linux
apt-get install libbio-graphics-perl
Windows (WSL2)
sudo apt-get update sudo apt-get install libbio-graphics-perl
Raspbian
apt-get install libbio-graphics-perl
Dockerfile
dockerfile.run/contig_draw

libbio-graphics-perl

Generate GD images of Bio::Seq objects

The Bio::Graphics::Panel class provides drawing and formatting services for any object that implements the Bio::SeqFeatureI interface, including Ace::Sequence::Feature, Das::Segment::Feature and Bio::DB::Graphics objects. It can be used to draw sequence annotations, physical (contig) maps, protein domains, or any other type of map in which a set of discrete ranges need to be laid out on the number line.