cram_filter
programs for manipulating DNA sequencing files
Install
- All systems
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curl cmd.cat/cram_filter.sh
- Debian
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apt-get install staden-io-lib-utils - Ubuntu
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apt-get install staden-io-lib-utils - Kali Linux
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apt-get install staden-io-lib-utils - Windows (WSL2)
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sudo apt-get updatesudo apt-get install staden-io-lib-utils - Raspbian
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apt-get install staden-io-lib-utils - Dockerfile
- dockerfile.run/cram_filter
staden-io-lib-utils
programs for manipulating DNA sequencing files
The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to maniuplate short reads generated by second and third generation sequencers and stored in SRF format.