deepnano_basecall_no_metrichor
alternative basecaller for MinION reads of genomic sequences
Install
- All systems
-
curl cmd.cat/deepnano_basecall_no_metrichor.sh
- Debian
-
apt-get install deepnano
- Ubuntu
-
apt-get install deepnano
- Kali Linux
-
apt-get install deepnano
- Windows (WSL2)
-
sudo apt-get update
sudo apt-get install deepnano
deepnano
alternative basecaller for MinION reads of genomic sequences
DeepNano is alternative basecaller for Oxford Nanopore MinION reads based on deep recurrent neural networks. Currently it works with SQK-MAP-006 and SQK-MAP-005 chemistry and as a postprocessor for Metrichor.