delly
Structural variant discovery by read analysis
Install
- All systems
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curl cmd.cat/delly.sh
- Debian
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apt-get install delly - Ubuntu
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apt-get install delly - Kali Linux
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apt-get install delly - Windows (WSL2)
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sudo apt-get updatesudo apt-get install delly - Dockerfile
- dockerfile.run/delly
delly
Structural variant discovery by read analysis
Delly performs Structural variant discovery by integrated paired-end and split-read analysis. It discovers, genotypes and visualizes deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome.