dialign-tx

Segment-based multiple sequence alignment

Install

All systems
curl cmd.cat/dialign-tx.sh
Debian Debian
apt-get install dialign-tx
Ubuntu
apt-get install dialign-tx
image/svg+xml Kali Linux
apt-get install dialign-tx
Raspbian
apt-get install dialign-tx

dialign-tx

Segment-based multiple sequence alignment

DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.