dotur
distance based OTU and richness estimation
Install
- All systems
-
curl cmd.cat/dotur.sh
- Debian
-
apt-get install dotur - Raspbian
-
apt-get install dotur - Dockerfile
- dockerfile.run/dotur
dotur
distance based OTU and richness estimation
DOTUR is a computer program that takes a distance matrix describing the genetic distance between DNA sequence data and assigns sequences to operational taxonomic units (OTUs) using either the furthest, average, or nearest neighbor algorithms for all possible distances that can be described using the distance matrix. Using the OTU composition data, DOTUR constructs collector's and rarefaction curves for sampling intensity, richness estimators, and diversity indices.