dpe

Structural variant discovery by read analysis

Install

All systems
curl cmd.cat/dpe.sh
Debian Debian
apt-get install delly
Ubuntu
apt-get install delly
image/svg+xml Kali Linux
apt-get install delly
Windows (WSL2)
sudo apt-get update sudo apt-get install delly
Dockerfile
dockerfile.run/dpe

delly

Structural variant discovery by read analysis

Delly performs Structural variant discovery by integrated paired-end and split-read analysis. It discovers, genotypes and visualizes deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome.