ezez_vx1

single-pass sequencing read accuracy improver

Install

All systems
curl cmd.cat/ezez_vx1.sh
Debian Debian
apt-get install sprai
Ubuntu
apt-get install sprai
image/svg+xml Kali Linux
apt-get install sprai
Windows (WSL2)
sudo apt-get update sudo apt-get install sprai
Raspbian
apt-get install sprai

sprai

single-pass sequencing read accuracy improver

Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.