ezez_vx1
single-pass sequencing read accuracy improver
Install
- All systems
-
curl cmd.cat/ezez_vx1.sh
- Debian
-
apt-get install sprai - Ubuntu
-
apt-get install sprai - Kali Linux
-
apt-get install sprai - Windows (WSL2)
-
sudo apt-get updatesudo apt-get install sprai - Raspbian
-
apt-get install sprai - Dockerfile
- dockerfile.run/ezez_vx1
sprai
single-pass sequencing read accuracy improver
Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.