f5pack
utilities for manipulating Oxford Nanopore Fast5 files
Install
- All systems
-
curl cmd.cat/f5pack.sh
- Debian
-
apt-get install fast5
- Ubuntu
-
apt-get install fast5
- Kali Linux
-
apt-get install fast5
- Windows (WSL2)
-
sudo apt-get update
sudo apt-get install fast5
- Dockerfile
- dockerfile.run/f5pack
fast5
utilities for manipulating Oxford Nanopore Fast5 files
The data produced by Oxford Nanopore Technologies (ONT) sequencers are stored in fast5 files, based on the HDF5 file format, with one file per sequenced read. This package provides utilities to inspect these files, as well as to pack them for more effficient use.