fixelcorrespondence

diffusion-weighted MRI white matter tractography

Install

All systems
curl cmd.cat/fixelcorrespondence.sh
Debian Debian
apt-get install mrtrix3
Ubuntu
apt-get install mrtrix3
image/svg+xml Kali Linux
apt-get install mrtrix3
Windows (WSL2)
sudo apt-get update sudo apt-get install mrtrix3
Dockerfile
dockerfile.run/fixelcorrespondence

mrtrix3

diffusion-weighted MRI white matter tractography

Set of tools to perform diffusion-weighted MRI white matter tractography of the brain in the presence of crossing fibres, using Constrained Spherical Deconvolution, and a probabilisitic streamlines algorithm. Magnetic resonance images in DICOM, ANALYZE, or uncompressed NIfTI format are supported.