hilive
realtime alignment of Illumina reads
Install
- All systems
-
curl cmd.cat/hilive.sh
- Debian
-
apt-get install hilive - Ubuntu
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apt-get install hilive - Kali Linux
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apt-get install hilive - Windows (WSL2)
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sudo apt-get updatesudo apt-get install hilive - Raspbian
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apt-get install hilive - Dockerfile
- dockerfile.run/hilive
hilive
realtime alignment of Illumina reads
HiLive is a read mapping tool that maps Illumina HiSeq (or comparable) reads to a reference genome right in the moment when they are produced. This means, read mapping is finished as soon as the sequencer is finished generating the data.