ipig
integrating PSMs into genome browser visualisations
Install
- All systems
-
curl cmd.cat/ipig.sh
- Debian
-
apt-get install ipig - Ubuntu
-
apt-get install ipig - Kali Linux
-
apt-get install ipig - Windows (WSL2)
-
sudo apt-get updatesudo apt-get install ipig - Raspbian
-
apt-get install ipig - Dockerfile
- dockerfile.run/ipig
ipig
integrating PSMs into genome browser visualisations
iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/). iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers.