jaligner
Smith-Waterman algorithm with Gotoh's improvement
Install
- All systems
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curl cmd.cat/jaligner.sh
- Debian
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apt-get install jaligner - Ubuntu
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apt-get install jaligner - Kali Linux
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apt-get install jaligner - Windows (WSL2)
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sudo apt-get updatesudo apt-get install jaligner - Raspbian
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apt-get install jaligner - Dockerfile
- dockerfile.run/jaligner
jaligner
Smith-Waterman algorithm with Gotoh's improvement
JAligner is an open source Java implementation of the Smith-Waterman algorithm with Gotoh's improvement for biological local pairwise sequence alignment with the affine gap penalty model.