jmol

Molecular Viewer

Install

All systems
curl cmd.cat/jmol.sh
Debian Debian
apt-get install jmol
Ubuntu
apt-get install jmol
Arch Arch Linux
pacman -S jmol
image/svg+xml Kali Linux
apt-get install jmol
Fedora
dnf install jmol
Windows (WSL2)
sudo apt-get update sudo apt-get install jmol
Raspbian
apt-get install jmol

jmol

Molecular Viewer

Jmol is a Java molecular viewer for three-dimensional chemical structures. Features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame files and computed normal modes from quantum programs. It includes with features for chemicals, crystals, materials and biomolecules. Jmol might be useful for students, educators, and researchers in chemistry and biochemistry. File formats read by Jmol include PDB, XYZ, CIF, CML, MDL Molfile, Gaussian, GAMESS, MOPAC, ABINIT, ACES-II, Dalton and VASP.

sagemath

Open Source Mathematics Software, free alternative to Magma, Maple, Mathematica, and Matlab