kalign
Global and progressive multiple sequence alignment
Install
- All systems
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curl cmd.cat/kalign.sh
- Debian
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apt-get install kalign - Ubuntu
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apt-get install kalign - Kali Linux
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apt-get install kalign - Windows (WSL2)
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sudo apt-get updatesudo apt-get install kalign - Raspbian
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apt-get install kalign - Dockerfile
- dockerfile.run/kalign
kalign
Global and progressive multiple sequence alignment
Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.