load_sequences.pl
pipeline for building loci from short-read DNA sequences
Install
- All systems
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curl cmd.cat/load_sequences.pl.sh
- Debian
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apt-get install stacks - Ubuntu
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apt-get install stacks - Kali Linux
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apt-get install stacks - Windows (WSL2)
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sudo apt-get updatesudo apt-get install stacks - Raspbian
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apt-get install stacks - Dockerfile
- dockerfile.run/load_sequences.pl
stacks
pipeline for building loci from short-read DNA sequences
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. Note that this package installs Stacks such that all commands must be run as: $ stacks <cmdname> <args>