make_initial_affine
Computational Morphometry Toolkit
Install
- All systems
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curl cmd.cat/make_initial_affine.sh
- Debian
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apt-get install cmtk - Ubuntu
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apt-get install cmtk - Kali Linux
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apt-get install cmtk - Windows (WSL2)
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sudo apt-get updatesudo apt-get install cmtk - Raspbian
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apt-get install cmtk - Dockerfile
- dockerfile.run/make_initial_affine
cmtk
Computational Morphometry Toolkit
A software toolkit for computational morphometry of biomedical images, CMTK comprises a set of command line tools and a back-end general-purpose library for processing and I/O. The command line tools primarily provide the following functionality: registration (affine and nonrigid; single and multi-channel; pairwise and groupwise), image correction (MR bias field estimation; interleaved image artifact correction), processing (filters; combination of segmentations via voting and STAPLE; shape-based averaging), statistics (t-tests; general linear regression).