maq
maps short fixed-length polymorphic DNA sequence reads to reference sequences
Install
- All systems
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curl cmd.cat/maq.sh
- Debian
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apt-get install maq - Ubuntu
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apt-get install maq - Kali Linux
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apt-get install maq - Windows (WSL2)
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sudo apt-get updatesudo apt-get install maq - Raspbian
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apt-get install maq - Dockerfile
- dockerfile.run/maq
maq
maps short fixed-length polymorphic DNA sequence reads to reference sequences
Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2. Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.