mdrun_mpich_d

Molecular dynamics sim, binaries for MPICH parallelization

Install

All systems
curl cmd.cat/mdrun_mpich_d.sh
Debian Debian
apt-get install gromacs-mpich
Ubuntu
apt-get install gromacs-mpich
image/svg+xml Kali Linux
apt-get install gromacs-mpich
Fedora
dnf install gromacs-mpich
Windows (WSL2)
sudo apt-get update sudo apt-get install gromacs-mpich
Raspbian
apt-get install gromacs-mpich

gromacs-mpich

Molecular dynamics sim, binaries for MPICH parallelization

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers. This package contains only the core simulation engine with parallel support using the MPICH (v3) interface. It is suitable for nodes of a processing cluster, or for multiprocessor machines.