ncbi-seg
tool to mask segments of low compositional complexity in amino acid sequences
Install
- All systems
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curl cmd.cat/ncbi-seg.sh
- Debian
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apt-get install ncbi-seg - Ubuntu
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apt-get install ncbi-seg - Kali Linux
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apt-get install ncbi-seg - Windows (WSL2)
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sudo apt-get updatesudo apt-get install ncbi-seg - Raspbian
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apt-get install ncbi-seg - Dockerfile
- dockerfile.run/ncbi-seg
ncbi-seg
tool to mask segments of low compositional complexity in amino acid sequences
ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences. ncbi-seg divides sequences into contrasting segments of low-complexity and high-complexity. Low-complexity segments defined by the algorithm represent "simple sequences" or "compositionally-biased regions". This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.
ncbi-seg-dbg
debug symbols for ncbi-seg
ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences. This package contains detached debug symbols for ncbi-seg.