nipypecli

Neuroimaging data analysis pipelines in Python

Install

All systems
curl cmd.cat/nipypecli.sh
Debian Debian
apt-get install python-nipype
Ubuntu
apt-get install python-nipype
image/svg+xml Kali Linux
apt-get install python-nipype
Windows (WSL2)
sudo apt-get update sudo apt-get install python-nipype
Raspbian
apt-get install python-nipype
Dockerfile
dockerfile.run/nipypecli

python-nipype

Neuroimaging data analysis pipelines in Python

Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia).