placnet
Plasmid Constellation Network project
Install
- All systems
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curl cmd.cat/placnet.sh
- Debian
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apt-get install placnet - Ubuntu
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apt-get install placnet - Kali Linux
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apt-get install placnet - Windows (WSL2)
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sudo apt-get updatesudo apt-get install placnet - Raspbian
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apt-get install placnet - Dockerfile
- dockerfile.run/placnet
placnet
Plasmid Constellation Network project
Placnet is a new tool for plasmid analysis in NGS projects. Placnet is optimized to work with Illumina sequences but it also works with 454, Iontorrent or any of the actual sequence technologies. The input of placnet is a set of contigs and one or more SAM files with the mapping of the reads against the contigs. Placnet obtains a set of files, easily opened on Cytoscape software or other network tools.