plink1

whole-genome association analysis toolset

Install

All systems
curl cmd.cat/plink1.sh
Debian Debian
apt-get install plink
Ubuntu
apt-get install plink
image/svg+xml Kali Linux
apt-get install plink
Windows (WSL2)
sudo apt-get update sudo apt-get install plink
Raspbian
apt-get install plink

plink

whole-genome association analysis toolset

plink expects as input the data from SNP (single nucleotide polymorphism) chips of many individuals and their phenotypical description of a disease. It finds associations of single or pairs of DNA variations with a phenotype and can retrieve SNP annotation from an online source. SNPs can evaluated individually or as pairs for their association with the disease phenotypes. The joint investigation of copy number variations is supported. A variety of statistical tests have been implemented. Please note: The executable was renamed to plink1 because of a name clash. Please read more about this in /usr/share/doc/plink/README.Debian.