plot_res

determine features of organisms, clades, taxonomic units, genes

Install

All systems
curl cmd.cat/plot_res.sh
Debian Debian
apt-get install lefse
Ubuntu
apt-get install lefse
image/svg+xml Kali Linux
apt-get install lefse
Raspbian
apt-get install lefse

lefse

determine features of organisms, clades, taxonomic units, genes

LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.