poretools
toolkit for nanopore nucleotide sequencing data
Install
- All systems
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curl cmd.cat/poretools.sh
- Debian
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apt-get install poretools - Ubuntu
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apt-get install poretools - Kali Linux
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apt-get install poretools - Windows (WSL2)
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sudo apt-get updatesudo apt-get install poretools - Raspbian
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apt-get install poretools - Dockerfile
- dockerfile.run/poretools
poretools
toolkit for nanopore nucleotide sequencing data
poretools is a flexible toolkit for exploring datasets generated by nanopore sequencing devices from MinION for the purposes of quality control and downstream analysis. Poretools operates directly on the native FAST5 (a variant of the HDF5 standard) file format produced by ONT and provides a wealth of format conversion utilities and data exploration and visualization tools.