pysurfer

visualize Freesurfer's data in Python

Install

All systems
curl cmd.cat/pysurfer.sh
Debian Debian
apt-get install python-surfer
Ubuntu
apt-get install python-surfer
image/svg+xml Kali Linux
apt-get install python-surfer
Windows (WSL2)
sudo apt-get update sudo apt-get install python-surfer
Raspbian
apt-get install python-surfer
Dockerfile
dockerfile.run/pysurfer

python-surfer

visualize Freesurfer's data in Python

This is a Python package for visualization and interaction with cortical surface representations of neuroimaging data from Freesurfer. It extends Mayavi’s powerful visualization engine with a high-level interface for working with MRI and MEG data. PySurfer offers both a command-line interface designed to broadly replicate Freesurfer’s Tksurfer program as well as a Python library for writing scripts to efficiently explore complex datasets.