rambo-k
Read Assignment Method Based On K-mers
Install
- All systems
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curl cmd.cat/rambo-k.sh
- Debian
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apt-get install rambo-k - Ubuntu
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apt-get install rambo-k - Kali Linux
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apt-get install rambo-k - Windows (WSL2)
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sudo apt-get updatesudo apt-get install rambo-k - Raspbian
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apt-get install rambo-k - Dockerfile
- dockerfile.run/rambo-k
rambo-k
Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences from Next Generation Sequencing data. RAMBO-K is a reference-based tool for rapid and sensitive extraction of one organisms reads from a mixed dataset. It is based on a Markov chain implementation, which uses genomic characteristics of each reference to assign reads to the associated set.