rate4site_doublerep

detector of conserved amino-acid sites

Install

All systems
curl cmd.cat/rate4site_doublerep.sh
Debian Debian
apt-get install rate4site
Ubuntu
apt-get install rate4site
image/svg+xml Kali Linux
apt-get install rate4site
Windows (WSL2)
sudo apt-get update sudo apt-get install rate4site
Raspbian
apt-get install rate4site

rate4site

detector of conserved amino-acid sites

Rate4Site calculates the relative evolutionary rate at each site using a probabilistic-based evolutionary model. This allows taking into account the stochastic process underlying sequence evolution within protein families and the phylogenetic tree of the proteins in the family. The conservation score at a site corresponds to the site's evolutionary rate.