scrm
simulator of evolution of genetic sequences
Install
- All systems
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curl cmd.cat/scrm.sh
- Debian
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apt-get install scrm - Ubuntu
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apt-get install scrm - Kali Linux
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apt-get install scrm - Windows (WSL2)
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sudo apt-get updatesudo apt-get install scrm - Raspbian
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apt-get install scrm - Dockerfile
- dockerfile.run/scrm
scrm
simulator of evolution of genetic sequences
scrm simulates the evolution of genetic sequences. It takes a neutral evolutionary model as input, and generates random sequences that evolved under the model. As coalescent simulator, it traces the ancestry of the sampled sequences backwards in time and is therefore extremely efficient. Compared to other coalescent simulators, it can simulate chromosome-scale sequences without a measureable reduction of genetic linkage between different sites.