soapdenovo-63mer
short-read assembly method to build de novo draft assembly
Install
- All systems
-
curl cmd.cat/soapdenovo-63mer.sh
- Debian
-
apt-get install soapdenovo
- Ubuntu
-
apt-get install soapdenovo
- Kali Linux
-
apt-get install soapdenovo
- Windows (WSL2)
-
sudo apt-get update
sudo apt-get install soapdenovo
- Dockerfile
- dockerfile.run/soapdenovo-63mer
soapdenovo
short-read assembly method to build de novo draft assembly
SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for the human-sized genomes. The program is specially designed to assemble Illumina GA short reads. It creates new opportunities for building reference sequences and carrying out accurate analyses of unexplored genomes in a cost effective way. This version is not maintained anymore, consider using soapdenovo2.