squizz
Converter for genetic sequences and alignments
Install
- All systems
-
curl cmd.cat/squizz.sh
- Debian
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apt-get install squizz - Ubuntu
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apt-get install squizz - Kali Linux
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apt-get install squizz - Windows (WSL2)
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sudo apt-get updatesudo apt-get install squizz - Raspbian
-
apt-get install squizz - Dockerfile
- dockerfile.run/squizz
squizz
Converter for genetic sequences and alignments
Squizz is a sequence/alignment format checker, but it has some conversion capabilities too. Most common sequence and alignment formats are supported : - EMBL, FASTA, GCG, GDE, GENBANK, IG, NBRF, PIR (codata), RAW, and SWISSPROT. - CLUSTAL, FASTA, MEGA, MSF, NEXUS, PHYLIP (interleaved and sequential) and STOCKHOLM.