summarizeModifications

detection of DNA modifications

Install

All systems
curl cmd.cat/summarizeModifications.sh
Debian Debian
apt-get install kineticstools
Ubuntu
apt-get install kineticstools
image/svg+xml Kali Linux
apt-get install kineticstools
Windows (WSL2)
sudo apt-get update sudo apt-get install kineticstools
Raspbian
apt-get install kineticstools
Dockerfile
dockerfile.run/summarizeModifications

kineticstools

detection of DNA modifications

Tools for detecting DNA modifications from single molecule, real-time (SMRT®) sequencing data. This tool implements the P_ModificationDetection module in SMRT® Portal, used by the RS_Modification_Detection and RS_Modifications_and_Motif_Detection protocol. Researchers interested in understanding or extending the modification detection algorithms can use these tools as a starting point. This package is part of the SMRTAnalysis suite.