surankco-score

Supervised Ranking of Contigs in de novo Assemblies

Install

All systems
curl cmd.cat/surankco-score.sh
Debian Debian
apt-get install surankco
Ubuntu
apt-get install surankco
image/svg+xml Kali Linux
apt-get install surankco
Windows (WSL2)
sudo apt-get update sudo apt-get install surankco
Raspbian
apt-get install surankco

surankco

Supervised Ranking of Contigs in de novo Assemblies

SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet.