surankco-score
Supervised Ranking of Contigs in de novo Assemblies
Install
- All systems
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curl cmd.cat/surankco-score.sh
- Debian
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apt-get install surankco - Ubuntu
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apt-get install surankco - Kali Linux
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apt-get install surankco - Windows (WSL2)
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sudo apt-get updatesudo apt-get install surankco - Raspbian
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apt-get install surankco - Dockerfile
- dockerfile.run/surankco-score
surankco
Supervised Ranking of Contigs in de novo Assemblies
SuRankCo is a machine learning based software to score and rank contigs from de novo assemblies of next generation sequencing data. It trains with alignments of contigs with known reference genomes and predicts scores and ranking for contigs which have no related reference genome yet.