tradis_gene_insert_sites

analyse the output from TraDIS analyses of genomic sequences

Install

All systems
curl cmd.cat/tradis_gene_insert_sites.sh
Debian Debian
apt-get install bio-tradis
Ubuntu
apt-get install bio-tradis
image/svg+xml Kali Linux
apt-get install bio-tradis
Windows (WSL2)
sudo apt-get update sudo apt-get install bio-tradis
Dockerfile
dockerfile.run/tradis_gene_insert_sites

bio-tradis

analyse the output from TraDIS analyses of genomic sequences

Bio-Tradis contains a set of tools to analyse the output from TraDIS analyses. The Bio-Tradis analysis pipeline is implemented as an extensible Perl library which can either be used as is, or as a basis for the development of more advanced analysis tools. Please note: You need to manually install BioConductor Edger which can not be distributed by Debian in recent version since it is using non-distributable code locfit.