tvc
genetic variant caller for Ion Torrent sequencing platforms
Install
- All systems
-
curl cmd.cat/tvc.sh
- Debian
-
apt-get install tvc - Ubuntu
-
apt-get install tvc - Kali Linux
-
apt-get install tvc - Windows (WSL2)
-
sudo apt-get updatesudo apt-get install tvc - Dockerfile
- dockerfile.run/tvc
tvc
genetic variant caller for Ion Torrent sequencing platforms
Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions.