velvetoptimiser

automatically optimise Velvet do novo assembly parameters

Install

All systems
curl cmd.cat/velvetoptimiser.sh
Debian Debian
apt-get install velvetoptimiser
Ubuntu
apt-get install velvetoptimiser
image/svg+xml Kali Linux
apt-get install velvetoptimiser
Windows (WSL2)
sudo apt-get update sudo apt-get install velvetoptimiser
Raspbian
apt-get install velvetoptimiser

velvetoptimiser

automatically optimise Velvet do novo assembly parameters

VelvetOptimiser is a multi-threaded Perl script for automatically optimising the three primary parameter options (K, -exp_cov, -cov_cutoff) for the Velvet de novo sequence assembler.