velvetoptimiser
automatically optimise Velvet do novo assembly parameters
Install
- All systems
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curl cmd.cat/velvetoptimiser.sh
- Debian
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apt-get install velvetoptimiser - Ubuntu
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apt-get install velvetoptimiser - Kali Linux
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apt-get install velvetoptimiser - Windows (WSL2)
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sudo apt-get updatesudo apt-get install velvetoptimiser - Raspbian
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apt-get install velvetoptimiser - Dockerfile
- dockerfile.run/velvetoptimiser
velvetoptimiser
automatically optimise Velvet do novo assembly parameters
VelvetOptimiser is a multi-threaded Perl script for automatically optimising the three primary parameter options (K, -exp_cov, -cov_cutoff) for the Velvet de novo sequence assembler.