wiggle2gff3
GMOD Generic Genome Browser
Install
- All systems
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curl cmd.cat/wiggle2gff3.sh
- Debian
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apt-get install gbrowse - Ubuntu
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apt-get install gbrowse - Kali Linux
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apt-get install gbrowse - Windows (WSL2)
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sudo apt-get updatesudo apt-get install gbrowse - Raspbian
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apt-get install gbrowse - Dockerfile
- dockerfile.run/wiggle2gff3
gbrowse
GMOD Generic Genome Browser
Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD). Some of its features: * Simultaneous bird's eye and detailed views of the genome; * Scroll, zoom, center; * Attach arbitrary URLs to any annotation; * Order and appearance of tracks are customizable by administrator and end-user; * Search by annotation ID, name, or comment; * Supports third party annotation using GFF formats; * Settings persist across sessions; * DNA and GFF dumps; * Connectivity to different databases, including BioSQL and Chado; * Multi-language support; * Third-party feature loading; * Customizable plug-in architecture (e.g. run BLAST, dump & import many formats, find oligonucleotides, design primers, create restriction maps, edit features).