hyphympi
Hypothesis testing using Phylogenies (MPI version)
Install
- All systems
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curl cmd.cat/hyphympi.sh
- Debian
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apt-get install hyphy-mpi - Ubuntu
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apt-get install hyphy-mpi - Kali Linux
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apt-get install hyphy-mpi - Windows (WSL2)
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sudo apt-get updatesudo apt-get install hyphy-mpi - Raspbian
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apt-get install hyphy-mpi - Dockerfile
- dockerfile.run/hyphympi
hyphy-mpi
Hypothesis testing using Phylogenies (MPI version)
HyPhy is an open-source software package for the analysis of genetic sequences using techniques in phylogenetics, molecular evolution, and machine learning. It features a complete graphical user interface (GUI) and a rich scripting language for limitless customization of analyses. Additionally, HyPhy features support for parallel computing environments (via message passing interface) and it can be compiled as a shared library and called from other programming environments such as Python or R. Continued development of HyPhy is currently supported in part by an NIGMS R01 award 1R01GM093939. This package provides an executable using MPI to do multiprocessing.