loki_count
MCMC linkage analysis on general pedigrees
Install
- All systems
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curl cmd.cat/loki_count.sh
- Debian
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apt-get install loki - Ubuntu
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apt-get install loki - Kali Linux
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apt-get install loki - Windows (WSL2)
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sudo apt-get updatesudo apt-get install loki - Raspbian
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apt-get install loki - Dockerfile
- dockerfile.run/loki_count
loki
MCMC linkage analysis on general pedigrees
Performs Markov chain Monte Carlo multipoint linkage analysis on large, complex pedigrees. The current package supports analyses on quantitative traits only, although this restriction will be lifted in later versions. Joint estimation of QTL number, position and effects uses Reversible Jump MCMC. It is also possible to perform affected only IBD sharing analyses.