seqs_from_psiblast_res
predicts if a substitution in a protein has a phenotypic effect
Install
- All systems
-
curl cmd.cat/seqs_from_psiblast_res.sh
- Ubuntu
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apt-get install sift - Kali Linux
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apt-get install sift - Windows (WSL2)
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sudo apt-get updatesudo apt-get install sift - OS X
-
brew install sift - Dockerfile
- dockerfile.run/seqs_from_psiblast_res
sift
predicts if a substitution in a protein has a phenotypic effect
SIFT is a sequence homology-based tool that sorts intolerant from tolerant amino acid substitutions and predicts whether an amino acid substitution in a protein will have a phenotypic effect. SIFT is based on the premise that protein evolution is correlated with protein function. Positions important for function should be conserved in an alignment of the protein family, whereas unimportant positions should appear diverse in an alignment.